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| author |   Petar Petrov <petar.petrov@student.oulu.fi> | 2015-03-27 07:58:54 +0700 |
|---|---|---|
| committer |   Willy Sudiarto Raharjo <willysr@slackbuilds.org> | 2015-03-27 07:58:54 +0700 |
| commit | c58570189ad9e3f5b13ae08737267c7d42aa2e1e (patch) | |
| tree | 5d15106c11dc068533a3511bb10f0b9340f1fe63 /academic | |
| parent | 25b5e0f23027f4b9bb01e66d742aa4ca3a9ca2e5 (diff) | |
| download | slackbuilds-c58570189ad9e3f5b13ae08737267c7d42aa2e1e.tar.gz slackbuilds-c58570189ad9e3f5b13ae08737267c7d42aa2e1e.tar.xz | |
academic/seaview: Updated for version 4.5.4.
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
Diffstat (limited to 'academic')
| -rw-r--r-- | academic/seaview/seaview.SlackBuild | 17 | ||||
| -rw-r--r-- | academic/seaview/seaview.info | 6 | ||||
| -rw-r--r-- | academic/seaview/slack-desc | 2 |
3 files changed, 14 insertions, 11 deletions
diff --git a/academic/seaview/seaview.SlackBuild b/academic/seaview/seaview.SlackBuild index 651cf2a4b3..de4b13147b 100644 --- a/academic/seaview/seaview.SlackBuild +++ b/academic/seaview/seaview.SlackBuild @@ -26,7 +26,7 @@ # Thanks to developer Dr. Manolo Gouy for all his help. PRGNAM=seaview -VERSION=${VERSION:-4.5.3.4} +VERSION=${VERSION:-4.5.4} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} @@ -77,13 +77,16 @@ sed -i "/^CFLAGS/s/=/+=/" Makefile # Enable PDF output. If you do not want it, comment out the next two # lines. Then you do not need to install PDFlib-Lite. -sed -i "7 c PDF_INC = /usr/include" Makefile -sed -i "8 c PDF_LIB = /usr/lib${LIBDIRSUFFIX}" Makefile +sed -i "8 c PDF_INC = /usr/include" Makefile +sed -i "9 c PDF_LIB = /usr/lib${LIBDIRSUFFIX}" Makefile +sed -i "s:#PDF_PS_FLAGS:PDF_PS_FLAGS:" Makefile +sed -i "s:#LPDF:LPDF:" Makefile # Point to fltk13 during compilation and make the produced executable # aware of the libraries' custom location -sed -i "11 c FLTK = /usr/include/fltk13" Makefile -sed -i "15 c CONFIG = /usr/bin/fltk13-config" Makefile +sed -i "16 c FLTK = /usr/include/fltk13" Makefile +sed -i "18 c CONFIG = /usr/bin/fltk13-config" Makefile +sed -i "s:#IFLTK:IFLTK:" Makefile # Point to the correct documentation path and phyml executable name sed -i "s:#HELPFILE:HELPFILE:" Makefile @@ -94,8 +97,8 @@ CFLAGS="$SLKCFLAGS" \ CXXFLAGS="$SLKCFLAGS" \ make -install -D -m755 seaview $PKG/usr/bin/$PRGNAM -install -D -m644 seaview.1 $PKG/usr/man/man1/$PRGNAM.1 +install -D -m755 $PRGNAM $PKG/usr/bin/$PRGNAM +install -D -m644 $PRGNAM.1 $PKG/usr/man/man1/$PRGNAM.1 find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \ | cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true diff --git a/academic/seaview/seaview.info b/academic/seaview/seaview.info index 8e9eea96dc..a1b90cf5f9 100644 --- a/academic/seaview/seaview.info +++ b/academic/seaview/seaview.info @@ -1,8 +1,8 @@ PRGNAM="seaview" -VERSION="4.5.3.4" +VERSION="4.5.4" HOMEPAGE="http://doua.prabi.fr/software/seaview" -DOWNLOAD="http://doua.prabi.fr/software/seaview_data/archive/seaview_4.5.3.4.tar.gz" -MD5SUM="a223849a96b698a6c60b77d2e2f1b877" +DOWNLOAD="ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.5.4.tar.gz" +MD5SUM="9c7797be6349bd5ad5dfa30297d3bd71" DOWNLOAD_x86_64="" MD5SUM_x86_64="" REQUIRES="fltk13 PDFlib-Lite Gblocks PhyML clustalo muscle" diff --git a/academic/seaview/slack-desc b/academic/seaview/slack-desc index afcfcfc490..7cb99f5334 100644 --- a/academic/seaview/slack-desc +++ b/academic/seaview/slack-desc @@ -11,7 +11,7 @@ seaview: seaview: SeaView is a multiplatform, graphical user interface for multiple seaview: sequence alignment and molecular phylogeny. seaview: -seaview: References: /usr/doc/seaview-4.5.3.4/References +seaview: References: /usr/doc/seaview-4.5.4/References seaview: Home: http://pbil.univ-lyon1.fr/software/seaview.html seaview: seaview: |