SlackBuilds Repository

14.2 > Academic > pysam (0.14.1)

Pysam is a python module for reading and manipulating files in the
SAM/BAM format. The SAM/BAM format is a way to store efficiently large
numbers of alignments (Li 2009), such as those routinely created by
next-generation sequencing methods.

Pysam is a lightweight wrapper of the samtools_ C-API. Pysam also
includes an interface for tabix.

Reference: Li et al. Bioinformatics. 2009 Aug 15;25(16):2078-9.
doi: 10.1093/bioinformatics/btp352.
The Sequence Alignment/Map format and SAMtools.

Maintained by: Rob van Nues
Keywords: sampools,python
ChangeLog: pysam

Homepage:
https://github.com/pysam-developers/pysam

Source Downloads:
pysam-0.14.1.tar.gz (ad88fa5bbcc0fdf4a936734691d9c9d1)

Download SlackBuild:
pysam.tar.gz
pysam.tar.gz.asc (FAQ)

(the SlackBuild does not include the source)

Individual Files:
README
pysam.SlackBuild
pysam.info
slack-desc

Validated for Slackware 14.2

See our HOWTO for instructions on how to use the contents of this repository.

Access to the repository is available via:
ftp git cgit http rsync

© 2006-2018 SlackBuilds.org Project. All rights reserved.
Slackware® is a registered trademark of Patrick Volkerding
Linux® is a registered trademark of Linus Torvalds
Web Design by WebSight Designs |  Managed Hosting by OnyxLight Communications