FastQC: A quality control tool for high throughput sequence data
FastQC aims to provide a simple way to do some quality control checks
on raw sequence data coming from high throughput sequencing pipelines.
It provides a modular set of analyses which you can use to give a
quick impression of whether your data has any problems of which you
should be aware before doing any further analysis.
The main functions of FastQC are
- Import of data from BAM, SAM or FastQ files (any variant)
- Providing a quick overview to tell you in which areas there may be
problems
- Summary graphs and tables to quickly assess your data
- Export of results to an HTML based permanent report
- Offline operation to allow automated generation of reports without
running the interactive application
This requires: zulu-openjdk11
Maintained by: Rob van Nues
Keywords: sequence,bam,sam,bioinformatics,dna
ChangeLog: fastqc
Homepage:
https://www.bioinformatics.babraham.ac.uk/projects/fastqc/
Download SlackBuild:
fastqc.tar.gz
fastqc.tar.gz.asc (FAQ)
(the SlackBuild does not include the source)
Individual Files: |
README |
doinst.sh |
fastqc.SlackBuild |
fastqc.desktop |
fastqc.info |
fastqc.png |
slack-desc |
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