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15.0 > Academic > mumsa (1.0)

Mumsa is a tool for automatic assessment of alignment quality. A number
of alternate (to be compared) multiple alignments have to be generated
and submitted.

Mumsa computes:
- the average overlap score (AOS), reflecting the difficulty of aligning
the sequences
- multiple overlap score (MOS) indicating the quality of each individual
alignment.

Both scores range between one and zero.

CITING
Lassmann T, Sonnhammer EL. Kalign, Kalignvu and Mumsa: web servers for
multiple sequence alignment. Nucleic Acids Res. 2006 Jul 1;34(Web Server
issue): W596-9. doi: 10.1093/nar/gkl191.
PMID: 16845078; PMCID: PMC1538774

Maintained by: Petar Petrov
Keywords: mumsa,msa,alignment,sequence,mos,aos,quality
ChangeLog: mumsa

Homepage:
https://msa.sbc.su.se/cgi-bin/msa.cgi

Source Downloads:
mumsa-1.0.tgz (80ad4dbd2dc2e5402ad9753c25cc896b)

Download SlackBuild:
mumsa.tar.gz
mumsa.tar.gz.asc (FAQ)

(the SlackBuild does not include the source)

Individual Files:
README
References.txt
mumsa.SlackBuild
mumsa.info
slack-desc

Validated for Slackware 15.0

See our HOWTO for instructions on how to use the contents of this repository.

Access to the repository is available via:
ftp git cgit http rsync

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