Tandem repeats finder: a program to analyze DNA sequences
A tandem repeat in DNA is two or more adjacent, approximate copies of a
pattern of nucleotides. Tandem Repeats Finder is a program to locate and
display tandem repeats in DNA sequences. In order to use the program,
the user submits a sequence in FASTA format.
Example usage:
trf hg38.fasta 2 5 7 80 10 50 2000 -l 6
LICENSE:
Please read the License Terms before downloading:
https://tandem.bu.edu/trf/trf.license.html
Please cite:
G. Benson "Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acids Research (1999) Vol. 27, No. 2, pp. 573-580.
Maintained by: Petar Petrov
Keywords: tandem repeats finder,dna,sequence,repeat
ChangeLog: trfind
Homepage:
https://tandem.bu.edu/trf/trf.html
Download SlackBuild:
trfind.tar.gz
trfind.tar.gz.asc (FAQ)
(the SlackBuild does not include the source)
Individual Files: |
LICENSE |
README |
References |
slack-desc |
trfind.SlackBuild |
trfind.info |
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